Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAATATGGATACTGAGACGAGAACACAGCACTGCATTGTCCAGCCAGGA
.((((((..(((((((((....&.)))))))))...)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_003783
GeneSymbolB3GALT2
Binding site210,259
Score1.0
Seed1
Au0.559
Energy-23.0
Binding len20
Me-7.163
Phylopstem-0.11428633333333332
Phylopflank0.5311380862499999
Longest consecutive pairings9
Position of longest consecutive pairings10
Pairings in 3prime end4
Position5UTR
2D Structure