Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GGATCTACGCCAGGC
.((((((.......((((((((&)))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDXM_017027051
GeneSymbolSPTBN4
Binding site3937,3952
Score0.815
Seed1
Au0.382
Energy-17.0
Binding len15
Me-16.723
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure