Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATCTACAATGTGCCAGT
..((((((((...(((((((..&))))))).)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_003806
GeneSymbolHRK
Binding site4671,4688
Score0.923
Seed1
Au0.647
Energy-19.4
Binding len17
Me-12.418
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure