Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCTGAATGCCAGGG
.((((((((.((..((((....&)))))).)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_003806
GeneSymbolHRK
Binding site2227,2243
Score0.923
Seed1
Au0.441
Energy-19.2
Binding len16
Me-7.182
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure