Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGATGGTACTGTGTGTGGCCCAGGA
.(((((((((((..(((.....&.)))..))))))..))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_003813
GeneSymbolADAM21
Binding site2064,2089
Score0.84
Seed1
Au0.544
Energy-17.0
Binding len20
Me-5.939
Phylopstem5.335720769230769
Phylopflank4.606672482499999
Longest consecutive pairings6
Position of longest consecutive pairings8
Pairings in 3prime end3
PositionCDS
2D Structure