Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGGAGGTCAAGGTGCAGTGA
((((((((.((((((((((...&))))))))))....))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001346022
GeneSymbolUSP45
Binding site5114,5138
Score0.846
Seed1
Au0.441
Energy-22.3
Binding len24
Me-4.994
Phylopstem3.4367753999999997
Phylopflank3.8921698087499994
Longest consecutive pairings10
Position of longest consecutive pairings14
Pairings in 3prime end5
Position3UTR
2D Structure