Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TTTGCTCAGAATGTTTAAAAGAAAGAAGATTCTATGATGGGCAGCTAGTA
.(((((((((((((((((((((&)))))))))))...........................))).))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001346022
GeneSymbolUSP45
Binding site223,273
Score0.981
Seed1
Au0.647
Energy-22.1
Binding len50
Me-3.793
Phylopstem0.8867831920408161
Phylopflank0.9018551319999999
Longest consecutive pairings11
Position of longest consecutive pairings39
Pairings in 3prime end8
PositionCDS
2D Structure