Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCATGGGGTGCTAGGG
.((((((((...((((((....&))))))...)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_003818
GeneSymbolCDS2
Binding site5488,5506
Score0.923
Seed1
Au0.456
Energy-21.2
Binding len18
Me-11.207
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure