Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCAGCCATCCAAGTAGCTGCGAC
(((((((((((((((..((((&)))))))))......)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_017027281
GeneSymbolKXD1
Binding site2247,2273
Score0.923
Seed1
Au0.397
Energy-23.4
Binding len26
Me-4.171
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure