Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGGCTCCCCAGCCATCAACGGCCGCAGCC
.....(((((((((((..(((&.)))....))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_017027281
GeneSymbolKXD1
Binding site3169,3201
Score0.923
Seed0
Au0.368
Energy-21.9
Binding len20
Me-13.666
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure