Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCAGACCATGCCAGA
..(((((((....(((((....&)))))....))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_003882
GeneSymbolCCN4
Binding site2160,2177
Score0.846
Seed1
Au0.456
Energy-17.6
Binding len17
Me-13.66
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure