Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&TGGGAGCAACCAGGGTTGCAAGTGGGATCTC
(((((((((((((((((((..&))))).......))))))))...))).))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_003895
GeneSymbolSYNJ1
Binding site885,916
Score0.923
Seed1
Au0.5
Energy-22.9
Binding len31
Me-3.938
Phylopstem0.29758912
Phylopflank0.3145201275000001
Longest consecutive pairings8
Position of longest consecutive pairings11
Pairings in 3prime end6
PositionCDS
2D Structure