Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TGTGTGCCAATGGTG
((((((((((((..........&)))))))))..))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_003925
GeneSymbolMBD4
Binding site1997,2012
Score1.0
Seed1
Au0.588
Energy-16.2
Binding len15
Me-7.052
Phylopstem0.4577171571428571
Phylopflank0.5812389712499999
Longest consecutive pairings9
Position of longest consecutive pairings6
Pairings in 3prime end0
Position3UTR
2D Structure