Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAGTGTACAAGGTGGGGTATGCCAAGGTA
(((((((((((..((((.((((&)))).)))).......)))))))).))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001346032
GeneSymbolRIPOR2
Binding site4792,4821
Score0.923
Seed1
Au0.647
Energy-19.2
Binding len29
Me-8.574
Phylopstem5.031241416666666
Phylopflank4.2293154275
Longest consecutive pairings8
Position of longest consecutive pairings5
Pairings in 3prime end7
Position3UTR
2D Structure