Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTTTCTATTGATATGCCAGA
..(((((((((((((.((((..&)))).))))).)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_003940
GeneSymbolUSP13
Binding site1986,2006
Score0.846
Seed1
Au0.603
Energy-17.3
Binding len20
Me-5.19
Phylopstem1.7630899285714288
Phylopflank1.91126929
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure