Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GGCTACAGCGCAGCTGCGGCTGCGC
.(((((((((((((((...((&.))...))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_017027407
GeneSymbolPPFIA3
Binding site352,377
Score0.923
Seed1
Au0.309
Energy-26.6
Binding len22
Me-3.793
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure