Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGCTACCGCAGCAGCTGCT
..((((((((.((.(((.(((&)))..))).)).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_017027407
GeneSymbolPPFIA3
Binding site2133,2154
Score1.0
Seed1
Au0.309
Energy-23.4
Binding len21
Me-8.639
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure