Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCTGTGGTGCTGGGTG
(((((((((.((..((((....&))))..))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_003963
GeneSymbolTM4SF5
Binding site258,276
Score0.846
Seed1
Au0.324
Energy-18.3
Binding len18
Me-7.326
Phylopstem-1.4586307777777778
Phylopflank-0.10212133041249999
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure