Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATCTGCTGAGATGCCAGC
..(((((((.....((((((..&))))))....))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_004056
GeneSymbolCA8
Binding site5501,5519
Score0.846
Seed1
Au0.618
Energy-17.1
Binding len18
Me-14.517
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure