Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGATGACCTTCAGCTGA
...((((((.((((((.((((&)))).))))))..)))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_017027837
GeneSymbolVSX1
Binding site1556,1576
Score0.923
Seed0
Au0.412
Energy-20.1
Binding len20
Me-7.757
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings6
Position of longest consecutive pairings9
Pairings in 3prime end7
Position3UTR
2D Structure