Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAATTTCTGGGTGGAGACCCAACTACAATGACATTGTCATGCCAGA
..((((((((((((((......&.))))))).))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_004163
GeneSymbolRAB27B
Binding site5222,5268
Score1.0
Seed1
Au0.632
Energy-20.2
Binding len17
Me-4.957
Phylopstem0.5711973533333333
Phylopflank0.07374211812499999
Longest consecutive pairings7
Position of longest consecutive pairings9
Pairings in 3prime end2
Position3UTR
2D Structure