Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGCGGCTGCCTCAGCTGGTGGACATGGCTGCT
..((((((((((((((.((((&))))))))))))................)))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_017028026
GeneSymbolSRC
Binding site1531,1566
Score0.846
Seed1
Au0.382
Energy-22.4
Binding len35
Me-4.957
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings12
Position of longest consecutive pairings23
Pairings in 3prime end7
PositionCDS
2D Structure