Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTCCCATGGTGTGCCAGT
..(((((((((.(((..(((..&))).))).))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_004187
GeneSymbolKDM5C
Binding site2048,2066
Score0.923
Seed1
Au0.456
Energy-17.4
Binding len18
Me-8.537
Phylopstem1.8440840777777778
Phylopflank3.0087941550000012
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure