Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAGTCTGCGTAATGTGCGTGTGAAGAGACTGGGGGAGCTGGCCGGGG
.((((((.((((((((((((((&))))))))))..))))........................)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_004208
GeneSymbolAIFM1
Binding site65,112
Score0.846
Seed1
Au0.353
Energy-18.9
Binding len47
Me-6.107
Phylopstem0.24077268750000003
Phylopflank1.0715937687499997
Longest consecutive pairings10
Position of longest consecutive pairings37
Pairings in 3prime end8
Position5UTR
2D Structure