Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAGGGCTCAGGGCTGGACCGGGGGCATTGTGTGCTTGGG
.((.((((((((((((......&.)))))))))))).)).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_004227
GeneSymbolCYTH3
Binding site2716,2755
Score0.846
Seed0
Au0.279
Energy-21.2
Binding len17
Me-6.825
Phylopstem4.10888825
Phylopflank3.9361884125
Longest consecutive pairings12
Position of longest consecutive pairings4
Pairings in 3prime end2
Position3UTR
2D Structure