Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGCAAAGCGCTCGGGCACCCTGAGCCAGATTACCGCTGGCTGA
...((((((((((((((((((&))))))))...........................))))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_017028281
GeneSymbolDSCAM
Binding site238,285
Score0.846
Seed0
Au0.397
Energy-22.7
Binding len47
Me-6.515
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings39
Pairings in 3prime end8
PositionCDS
2D Structure