Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TGCTCTGTGTCAGCCAGGA
.(((((((((((..(((.....&)))..)))))..)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_004257
GeneSymbolTGFBRAP1
Binding site2788,2807
Score0.846
Seed1
Au0.412
Energy-17.4
Binding len19
Me-5.939
Phylopstem-0.08117740769230768
Phylopflank-0.03504240624999999
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure