Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&TGGGAGGCAGGTCGGGGA
...((((((.(((.(((((..&))))))))..).))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_004272
GeneSymbolHOMER1
Binding site5729,5747
Score0.846
Seed0
Au0.544
Energy-21.7
Binding len18
Me-8.614
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings10
Pairings in 3prime end5
Position3UTR
2D Structure