Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGGATTGATGCTGGA
..(((((((.((((.((((...&)))).))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_004279
GeneSymbolPMPCB
Binding site272,289
Score0.923
Seed1
Au0.574
Energy-16.9
Binding len17
Me-6.935
Phylopstem3.7520204285714285
Phylopflank3.3079727125000007
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure