Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GCAAGGGTGCCAGGG
.((((((((.(..(((......&)))..))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_004292
GeneSymbolRIN1
Binding site2221,2236
Score0.923
Seed1
Au0.368
Energy-16.7
Binding len15
Me-9.672
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure