Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTCAGCACTTGGAATACAAGATGGTTGCCGGGTC
((((((((..((.((((.....&.))))...))..)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_004323
GeneSymbolBAG1
Binding site645,679
Score0.923
Seed1
Au0.544
Energy-18.6
Binding len21
Me-7.526
Phylopstem-0.44476412499999995
Phylopflank-0.33012879000000006
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure