Details of Duplex


2D Structure dot-bracket from RNAduplex"
CAGGCCATATTGTGCTGCCTCA&GCGGCCGCCGGCGGGACTGGTCTGA
(((((((....((.(((((...&.))))).))))))))).
Details
MiRNAhsa-miR-15a-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site15,40
Score0.923
Seed1
Au0.309
Energy-21.7
Binding len17
Me-12.232
Phylopstem0.2943073285714285
Phylopflank0.35687814321428574
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure