Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACTGCCCTAAGTGCTCCTTCTGG&CCACAAACAAAAGGAGTACTAGAGCAA
..(((.((.((((((((((.((.&.)).)))))))))))).))).
Details
MiRNAhsa-miR-18a-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1657,1684
Score1.0
Seed0
Au0.588
Energy-21.6
Binding len21
Me-7.914
Phylopstem3.652440000000001
Phylopflank3.9947659049999986
Longest consecutive pairings12
Position of longest consecutive pairings5
Pairings in 3prime end6
PositionCDS
2D Structure