Details of Duplex


2D Structure dot-bracket from RNAduplex"
AAGCTGCCAGTTGAAGAACTGT&ACAACAATATAACTGGTAGTTC
.((((((((((((.........&.)))))))))))).
Details
MiRNAhsa-miR-22-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site2318,2340
Score0.923
Seed1
Au0.706
Energy-16.2
Binding len14
Me-5.619
Phylopstem4.955916916666667
Phylopflank4.20723046125
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end0
Position3UTR
2D Structure