Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGGGCTTAGCTGCTTGTGAGCA&GTTAATGGCAGCTGCTGAAGGGCACCC
.(((((((((((((....(((.&)))...))))))))......))).)).
Details
MiRNAhsa-miR-27a-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1503,1530
Score0.923
Seed1
Au0.574
Energy-18.1
Binding len27
Me-4.762
Phylopstem3.731546450000001
Phylopflank3.1284732349999995
Longest consecutive pairings8
Position of longest consecutive pairings13
Pairings in 3prime end3
PositionCDS
2D Structure