Details of Duplex


2D Structure dot-bracket from RNAduplex"
TATTGCACTTGTCCCGGCCTGT&GCGCGGCCGCCGGCGGGACTGGTCTGAAGAGACGCGGGGACCAAGTGGCAAC
..(((((((((((((.((....&.)).))))).))))).))).
Details
MiRNAhsa-miR-92a-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site13,65
Score0.846
Seed1
Au0.397
Energy-21.3
Binding len20
Me-5.19
Phylopstem0.20507566
Phylopflank0.2783926010714286
Longest consecutive pairings5
Position of longest consecutive pairings11
Pairings in 3prime end3
Position5UTR
2D Structure