Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACTGCTGAGCTAGCACTTCCCG&TGTGGAGGTGCATACATTAAACTCCTAGCAGA
.((((((((...((((((((((&)).))))))))..........)))..))))).
Details
MiRNAhsa-miR-93-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site571,603
Score0.846
Seed1
Au0.647
Energy-18.6
Binding len32
Me-11.207
Phylopstem4.449090181818182
Phylopflank5.174431250000001
Longest consecutive pairings8
Position of longest consecutive pairings21
Pairings in 3prime end8
PositionCDS
2D Structure