Details of Duplex


2D Structure dot-bracket from RNAduplex"
AACCCGTAGATCCGATCTTGTG&ATGAGAGCACAGGATCTGGAGATGGGC
..(((((...((((((((((((&.))))))))).))).))))).
Details
MiRNAhsa-miR-99a-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1886,1913
Score0.923
Seed0
Au0.544
Energy-22.2
Binding len21
Me-9.57
Phylopstem3.8135281538461543
Phylopflank4.638444586250001
Longest consecutive pairings9
Position of longest consecutive pairings11
Pairings in 3prime end8
PositionCDS
2D Structure