Details of Duplex


2D Structure dot-bracket from RNAduplex"
CAAGCTCGCTTCTATGGGTCTG&GGACCTGGAAGAGGAAAAAAAGCAAAATGATGGTGAAATGCTTGA
(((((((((((((.(((((((.&)))))))..)))...................)))))...))))).
Details
MiRNAhsa-miR-99a-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1722,1767
Score0.846
Seed1
Au0.632
Energy-17.5
Binding len45
Me-4.794
Phylopstem3.6466581714285717
Phylopflank4.000979425
Longest consecutive pairings7
Position of longest consecutive pairings38
Pairings in 3prime end7
PositionCDS
2D Structure