Details of Duplex


2D Structure dot-bracket from RNAduplex"
CAAGCTCGCTTCTATGGGTCTG&CCCGAGAGGGATGTTTGG
(((((((.(((((.((((....&))))))))))).))))).
Details
MiRNAhsa-miR-99a-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1977,1995
Score0.923
Seed1
Au0.632
Energy-16.8
Binding len18
Me-7.108
Phylopstem2.8829801999999995
Phylopflank3.4307684225000004
Longest consecutive pairings11
Position of longest consecutive pairings7
Pairings in 3prime end4
Position3UTR
2D Structure