Details of Duplex


2D Structure dot-bracket from RNAduplex"
TAGCACCATTTGAAATCAGTGTT&CACTGGGCTGCAGATGGTTGGAGATGGAAAATAATGATAGCAAATGCTAA
((((((((((((...((((((..&))))))....))))))))...........................)))).
Details
MiRNAhsa-miR-29b-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1432,1482
Score0.846
Seed1
Au0.662
Energy-18.2
Binding len50
Me-6.819
Phylopstem3.318196117948718
Phylopflank2.9874210900000007
Longest consecutive pairings8
Position of longest consecutive pairings32
Pairings in 3prime end6
PositionCDS
2D Structure