Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACGGATGTTTGAGCATGTGCTA&AGTTTTCGAAGAGAAACATGCCAAACCTCCA
..(((.(((((.((((((.((.&.))..))))))))))).))).
Details
MiRNAhsa-miR-105-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site729,760
Score0.846
Seed0
Au0.632
Energy-19.2
Binding len21
Me-10.205
Phylopstem5.634885
Phylopflank4.72938683
Longest consecutive pairings11
Position of longest consecutive pairings5
Pairings in 3prime end6
PositionCDS
2D Structure