Details of Duplex


2D Structure dot-bracket from RNAduplex"
TAGGTAGTTTCATGTTGTTGGG&CCAATAGCATTAATTACTTC
.((((((((..((((((((((.&)))))))))).)))))))).
Details
MiRNAhsa-miR-196a-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1567,1587
Score0.923
Seed1
Au0.647
Energy-18.3
Binding len20
Me-7.861
Phylopstem5.6640744000000005
Phylopflank3.8783924249999995
Longest consecutive pairings10
Position of longest consecutive pairings10
Pairings in 3prime end7
PositionCDS
2D Structure