Details of Duplex


2D Structure dot-bracket from RNAduplex"
CGGGTAGAGAGGGCAGTGGGAGG&TCCTTCTGCCGTCAAACCAGAAGACTGGGATGAAAGTGAACCTGCCCA
.((((((.((.(((((.((((..&)))).))))).))............................)))))).
Details
MiRNAhsa-miR-197-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site978,1026
Score0.846
Seed1
Au0.574
Energy-25.0
Binding len48
Me-8.932
Phylopstem5.491232166666667
Phylopflank5.0080194125
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure