Details of Duplex


2D Structure dot-bracket from RNAduplex"
CGGGTAGAGAGGGCAGTGGGAGG&CTTCTGACTTCTTTCAGTGCTCT
.(((((..(((((.(((.(((((&))))).))).)))))..))))).
Details
MiRNAhsa-miR-197-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1330,1353
Score1.0
Seed0
Au0.588
Energy-20.8
Binding len23
Me-8.507
Phylopstem2.81858592
Phylopflank3.5459848975
Longest consecutive pairings5
Position of longest consecutive pairings18
Pairings in 3prime end7
PositionCDS
2D Structure