Details of Duplex


2D Structure dot-bracket from RNAduplex"
GGTCCAGAGGGGAGATAGGTTC&CCTATATCATTATGTTTGGACCA
((((((((...((.(((((...&))))).))......)))))))).
Details
MiRNAhsa-miR-198
RefseqIDNM_004362
GeneSymbolCLGN
Binding site644,667
Score1.0
Seed1
Au0.735
Energy-18.6
Binding len23
Me-9.918
Phylopstem4.8155725
Phylopflank4.720375802500001
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure