Details of Duplex


2D Structure dot-bracket from RNAduplex"
GAGCTTTTGGCCCGGGTTATAC&AACCTGCTGGCTGGCTTG
(((((...((((((((((....&))))))..))))))))).
Details
MiRNAhsa-miR-208a-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1049,1067
Score1.0
Seed0
Au0.603
Energy-16.9
Binding len18
Me-9.696
Phylopstem4.824074583333334
Phylopflank4.746397737499999
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure