Details of Duplex


2D Structure dot-bracket from RNAduplex"
TGTAAACATCCTACACTCTCAGC&GAGAGGGATGTTTGGCAT
(((((((((((....(((((...&)))))))))))))).)).
Details
MiRNAhsa-miR-30c-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1980,1998
Score1.0
Seed1
Au0.632
Energy-17.8
Binding len18
Me-10.166
Phylopstem3.4856133000000002
Phylopflank3.4731625475000003
Longest consecutive pairings14
Position of longest consecutive pairings4
Pairings in 3prime end5
Position3UTR
2D Structure