Details of Duplex


2D Structure dot-bracket from RNAduplex"
TGGAGACGCGGCCCTGTTGGAGT&CTCCTAGAGGATGTGGTTCCTCCT
.((((..((.(((((.(.((((.&)))).).)))..)).))..)))).
Details
MiRNAhsa-miR-139-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site877,901
Score0.923
Seed0
Au0.559
Energy-20.0
Binding len24
Me-8.714
Phylopstem2.4734794285714288
Phylopflank4.62766356375
Longest consecutive pairings4
Position of longest consecutive pairings20
Pairings in 3prime end5
PositionCDS
2D Structure