Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACAGATTCGATTCTAGGGGAAT&CTCCTAGAGGATGTGG
.((.((((...((((((((...&)))))))))))).)).
Details
MiRNAhsa-miR-10b-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site877,893
Score0.846
Seed0
Au0.588
Energy-16.4
Binding len16
Me-11.949
Phylopstem4.408784125
Phylopflank4.732737565000001
Longest consecutive pairings12
Position of longest consecutive pairings4
Pairings in 3prime end5
PositionCDS
2D Structure